ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7rn5A1 - ECOD Domain | ECOD

ECOD/Domains/e7rn5A1

e7rn5A1

UID: 002785433

PDB

Range: A:56-368
PDB: 7RN5 chain A(all domains)

Molecule: Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

3D Structure

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Related Domains

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Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPTA(109.4.1.18)

Ligands

in contact, ≤ 4 Å

Pyrophosphoric acidPPV
drugDrugBank DB04160
[4-[[3-(2,2-dimethylpropyl)-1~{H}-benzimidazol-2-yl]methyl]piperazin-1-yl]-(1,3,5-trimethylpyrazol-4-yl)methanone60I
Acetyl group

Pfam Families

Protein prenyltransferase alpha subunit repeat

ClanCL0020TPR

External Links

ECOD PDB View: 7RN5 RCSB PDB: 7RN5 PDBe: 7RN5

Downloads

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Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.