ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1wwjC1 - ECOD Domain | ECOD

ECOD/Domains/e1wwjC1

e1wwjC1

UID: 000278596

PDB

Range: C:2001-2098
PDB: 1WWJ chain C(all domains)
UniProt: P74645 (all domains)
Gene: kaiB1

Molecule: Circadian clock protein kaiB

3D Structure

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Related Domains

Browse other domains in KaiB →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupThioredoxin-like(2485.1)

TT-groupThioredoxin-like(2485.1.1)

FFamilyKaiB(2485.1.1.27)

Ligands

in contact, ≤ 4 Å

N,N,N-trimethylglyciniumBET
drugDrugBank DB04455

+ 2 additives (D-Malic acid, Imidazole)

D-Malic acidMLT
DrugBank DB03499

Pfam Families

KaiB domain

ClanCL0172Thioredoxin

External Links

ECOD PDB View: 1WWJ RCSB PDB: 1WWJ PDBe: 1WWJ UniProt: P74645

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

ImidazoleIMD

Shown in the structure viewer. Drug annotations from DrugDomain.