ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7aqxB1 - ECOD Domain | ECOD

ECOD/Domains/e7aqxB1

e7aqxB1

UID: 002791486

PDB

Range: B:27-388
PDB: 7AQX chain B(all domains)

Molecule: Variant surface glycoprotein MITAT 1.2

3D Structure

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Related Domains

Browse other domains in Trypan_glycop →

Classification

AArchitecturealpha bundles(a.7)

XX-groupVSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor(1189)

HH-groupVSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor(1189.1)

TT-groupVSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor(1189.1.1)

FFamilyTrypan_glycop(1189.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00913Trypan_glycop

Trypanosome variant surface glycoprotein (A-type)

External Links

ECOD PDB View: 7AQX RCSB PDB: 7AQX PDBe: 7AQX

Downloads

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