ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xpgA2 - ECOD Domain | ECOD

ECOD/Domains/e1xpgA2

e1xpgA2

UID: 000279348

PDB

Range: A:2-362
PDB: 1XPG chain A(all domains)
UniProt: Q9X112 (all domains)
Gene: metE

Molecule: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase

3D Structure

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Related Domains

Browse other domains in Meth_synt_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyMeth_synt_1(2002.1.1.154)

Ligands

in contact, ≤ 4 Å

Levomefolic acidC2F
drugDrugBank DB11256
ErythritolMRY
drugDrugBank DB04481

+ 1 additive (Sulfate ion)

Pfam Families

PF08267Meth_synt_1

Cobalamin-independent synthase, N-terminal domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1XPG RCSB PDB: 1XPG PDBe: 1XPG UniProt: Q9X112

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.