ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7dmkA1 - ECOD Domain | ECOD

ECOD/Domains/e7dmkA1

e7dmkA1

UID: 002793485

PDB

Range: A:11-428
PDB: 7DMK chain A(all domains)

Molecule: BcAlyPL6

3D Structure

Loading viewer...

Related Domains

Browse other domains in Chondroitinas_B →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyChondroitinas_B(207.2.1.24)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14592Chondroitinas_B

Chondroitinase B

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 7DMK RCSB PDB: 7DMK PDBe: 7DMK

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure