ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7dmkD1 - ECOD Domain | ECOD

ECOD/Domains/e7dmkD1

e7dmkD1

UID: 002793491

PDB

Range: D:14-428
PDB: 7DMK chain D(all domains)

Molecule: BcAlyPL6

3D Structure

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Related Domains

Browse other domains in Chondroitinas_B →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyChondroitinas_B(207.2.1.24)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Malonate Ion)

Malonate IonMLI
DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14592Chondroitinas_B

Chondroitinase B

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 7DMK RCSB PDB: 7DMK PDBe: 7DMK

Downloads

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