ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7mdiB1 - ECOD Domain | ECOD

ECOD/Domains/e7mdiB1

e7mdiB1

UID: 002797867

PDB

Range: B:224-738
PDB: 7MDI chain B(all domains)

Molecule: Ribonucleoside-diphosphate reductase subunit alpha

3D Structure

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Related Domains

Browse other domains in Ribonuc_red_lgC →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTen stranded beta/alpha barrel(2500)

HH-groupTen stranded beta/alpha barrel(2500.1)

TT-groupTen stranded beta/alpha barrel(2500.1.1)

FFamilyRibonuc_red_lgC(2500.1.1.2)

Ligands

in contact, ≤ 4 Å

Cytidine-5'-DiphosphateCDP
drugDrugBank DB04555
dATPDTP
drugDrugBank DB03222

Shown in the structure viewer.

Pfam Families

PF02867Ribonuc_red_lgC

Ribonucleotide reductase, barrel domain

ClanCL0339PFL-like

External Links

ECOD PDB View: 7MDI RCSB PDB: 7MDI PDBe: 7MDI

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.