ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7n12B1 - ECOD Domain | ECOD

ECOD/Domains/e7n12B1

e7n12B1

UID: 002798665

PDB

Range: B:304-498
PDB: 7N12 chain B(all domains)

Molecule: Leucine--tRNA ligase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilytRNA-synt_1_2(1.1.1.7)

Ligands

in contact, ≤ 4 Å

[(1S,5R,6R,7'S,8R)-7'-(aminomethyl)-6-(6-aminopurin-9-yl)-2'-(3-oxidanylpropoxy)spiro[2,4,7-trioxa-3-boranuidabicyclo[3.3.0]octane-3,9'-8-oxa-9-boranuidabicyclo[4.3.0]nona-1(6),2,4-triene]-8-yl]methyl dihydrogen phosphate365

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF13603tRNA-synt_1_2

Leucyl-tRNA synthetase, editing domain

ClanCL0039HUP

External Links

ECOD PDB View: 7N12 RCSB PDB: 7N12 PDBe: 7N12

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.