ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1x08A1 - ECOD Domain | ECOD

ECOD/Domains/e1x08A1

e1x08A1

UID: 000280114

PDB

Range: A:13-240
PDB: 1X08 chain A(all domains)
UniProt: P60472 (all domains)
Gene: ispU

Molecule: Undecaprenyl pyrophosphate synthetase

3D Structure

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Related Domains

Browse other domains in Prenyltransf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUndecaprenyl diphosphate synthase(7534)

HH-groupUndecaprenyl diphosphate synthase(7534.1)

TT-groupUndecaprenyl diphosphate synthase(7534.1.1)

FFamilyPrenyltransf(7534.1.1.1)

Ligands

in contact, ≤ 4 Å

Farnesyl thiopyrophosphateFPS
drugDrugBank DB04695
ISOPENTENYL PYROPHOSPHATEIPE
drugDrugBank DB04714

Pfam Families

PF01255Prenyltransf

Putative undecaprenyl diphosphate synthase

External Links

ECOD PDB View: 1X08 RCSB PDB: 1X08 PDBe: 1X08 UniProt: P60472

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.