ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7oobb2 - ECOD Domain | ECOD

ECOD/Domains/e7oobb2

e7oobb2

UID: 002801167

PDB

Range: b:754-1011,b:1383-1399
PDB: 7OOB chain b(all domains)

Molecule: DNA excision repair protein ERCC-6

3D Structure

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Related Domains

Browse other domains in SNF2-rel_dom,Helicase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySNF2-rel_dom,Helicase_C(2004.1.1.24)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Beryllium trifluoride ionBEF
Magnesium ionMG

Pfam Families

PF00176SNF2-rel_dom

SNF2-related domain

ClanCL0023P-loop_NTPase

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 7OOB RCSB PDB: 7OOB PDBe: 7OOB

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.