ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7oy2C1 - ECOD Domain | ECOD

ECOD/Domains/e7oy2C1

e7oy2C1

UID: 002801638

PDB

Range: C:178-259,C:309-350,C:370-504
PDB: 7OY2 chain C(all domains)

Molecule: Cytochrome bd-II ubiquinol oxidase subunit 1

3D Structure

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Related Domains

Browse other domains in Cyt_bd_oxida_I →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupTransmembrane di-heme cytochromes(5069.1.1)

FFamilyCyt_bd_oxida_I(5069.1.1.3)

Ligands

in contact, ≤ 4 Å

Hybrid Between B and C Type Hemes (Protoporphyrin Ixcontaining Fe)HEB
drugDrugBank DB02182
Cis-heme d hydroxychlorin gamma-spirolactoneHDD
(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate

Pfam Families

PF01654Cyt_bd_oxida_I

Cytochrome bd terminal oxidase subunit I

External Links

ECOD PDB View: 7OY2 RCSB PDB: 7OY2 PDBe: 7OY2

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.