ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pm1X1 - ECOD Domain | ECOD

ECOD/Domains/e1pm1X1

e1pm1X1

UID: 000028023

PDB

Range: X:1-179
PDB: 1PM1 chain X(all domains)
UniProt: Q26241 (all domains)

Molecule: Nitrophorin 2

3D Structure

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Related Domains

Browse other domains in Nitrophorin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyNitrophorin(9.1.1.2)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer.

Pfam Families

PF02087Nitrophorin

Nitrophorin

ClanCL0116Calycin

External Links

ECOD PDB View: 1PM1 RCSB PDB: 1PM1 PDBe: 1PM1 UniProt: Q26241

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.