ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7pd3r1 - ECOD Domain | ECOD

ECOD/Domains/e7pd3r1

e7pd3r1

UID: 002802305

PDB

Range: r:35-196
PDB: 7PD3 chain r(all domains)

Molecule: 39S ribosomal protein S18a, mitochondrial

3D Structure

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Related Domains

Browse other domains in Ribosomal_S18 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyRibosomal_S18(101.1.1.7)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateA
drugDrugBank DB00131within 5 Å only
Cytidine-5'-MonophosphateC
drugDrugBank DB03403

Pfam Families

PF01084Ribosomal_S18

Ribosomal protein S18

ClanCL0123HTH

External Links

ECOD PDB View: 7PD3 RCSB PDB: 7PD3 PDBe: 7PD3

Downloads

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within 5 Å only

Uridine monophosphateU

drugDrugBank DB03685within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.