ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7pilM1 - ECOD Domain | ECOD

ECOD/Domains/e7pilM1

e7pilM1

UID: 002802470

PDB

Range: M:1-307
PDB: 7PIL chain M(all domains)

Molecule: Reaction center protein M chain

3D Structure

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Related Domains

Browse other domains in Photo_RC →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBacterial photosystem II reaction centre L and M subunits-like(5037)

HH-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1)

TT-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1.1)

FFamilyPhoto_RC(5037.1.1.1)

Ligands

in contact, ≤ 4 Å

Bacteriochlorophyll ABCL
drugDrugBank DB01853
UbidecarenoneU10
drugDrugBank DB09270
Ubiquinone Q1

Pfam Families

PF00124Photo_RC

Photosynthetic reaction centre protein

External Links

ECOD PDB View: 7PIL RCSB PDB: 7PIL PDBe: 7PIL

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB08689

1,2-Distearoyl-sn-glycerophosphoethanolamine3PE

Bacteriopheophytin aBPH

(2R,5R,11R,14R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-2,14-bis(tetradecanoyloxy)-4,6,10,12,16-pentaoxa-5,11-diphosphatriacont-1-yl tetradecanoateCD4

FE (III) IONFE

metal

SpheroideneSPO

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.