ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yyqB1 - ECOD Domain | ECOD

ECOD/Domains/e1yyqB1

e1yyqB1

UID: 000280419

PDB

Range: B:4-354
PDB: 1YYQ chain B(all domains)
UniProt: P13513 (all domains)
Gene: TRI5

Molecule: Trichodiene synthase

3D Structure

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Related Domains

Browse other domains in TRI5 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilyTRI5(141.1.1.5)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
PYROPHOSPHATE 2-POP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Trichodiene synthase (TRI5)

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 1YYQ RCSB PDB: 1YYQ PDBe: 1YYQ UniProt: P13513

Downloads

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