ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7vuxA1 - ECOD Domain | ECOD

ECOD/Domains/e7vuxA1

e7vuxA1

UID: 002808557

PDB

Range: A:31-152
PDB: 7VUX chain A(all domains)

Molecule: Programmed cell death protein 1

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

ThreonineTHR
drugDrugBank DB00156
Magnesium ionMG
metal

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 7VUX RCSB PDB: 7VUX PDBe: 7VUX

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.