ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7stzC5 - ECOD Domain | ECOD

ECOD/Domains/e7stzC5

e7stzC5

UID: 002814301

PDB

Range: C:101-213
PDB: 7STZ chain C(all domains)

Molecule: Cadherin-1

3D Structure

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Related Domains

Browse other domains in Cadherin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCadherin(11.1.1.1)

Ligands

in contact, ≤ 4 Å

beta-D-mannopyranoseBMA
Calcium ionCA
metal
alpha-D-mannopyranoseMAN

+ 2 additives (1,2-ETHANEDIOL, Tetraethylene glycol)

1,2-ETHANEDIOLEDO

Pfam Families

PF00028Cadherin

Cadherin domain

ClanCL0159E-set

External Links

ECOD PDB View: 7STZ RCSB PDB: 7STZ PDBe: 7STZ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.