ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vd3A1 - ECOD Domain | ECOD

ECOD/Domains/e1vd3A1

e1vd3A1

UID: 000281438

PDB

Range: A:1-204
PDB: 1VD3 chain A(all domains)
UniProt: Q9SSV1 (all domains)
Gene: NGR3

Molecule: RNase NGR3

3D Structure

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Related Domains

Browse other domains in Ribonuclease_T2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibonuclease Rh-like(280)

HH-groupRibonuclease Rh-like(280.1)

TT-groupRibonuclease Rh-like(280.1.1)

FFamilyRibonuclease_T2(280.1.1.1)

Ligands

in contact, ≤ 4 Å

PHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL]ESTERU2P

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00445Ribonuclease_T2

Ribonuclease T2 family

External Links

ECOD PDB View: 1VD3 RCSB PDB: 1VD3 PDBe: 1VD3 UniProt: Q9SSV1

Downloads

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