ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7l2tC1 - ECOD Domain | ECOD

ECOD/Domains/e7l2tC1

e7l2tC1

UID: 002817113

PDB

Range: C:416-719
PDB: 7L2T chain C(all domains)

Molecule: Transient receptor potential cation channel subfamily V member 1

3D Structure

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Related Domains

Browse other domains in YVC1_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyYVC1_C(5054.1.1.58)

Ligands

in contact, ≤ 4 Å

(9R,12R)-15-amino-12-hydroxy-6,12-dioxo-7,11,13-trioxa-12lambda~5~-phosphapentadecan-9-yl undecanoate65I
Sodium ionNA
metal
(2S)-1-(butanoyloxy)-3-{[(R)-hydroxy{[(1r,2R,3S,4S,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoateXJ7

Pfam Families

Calcium channel YVC1-like, C-terminal

ClanCL0030Ion_channel

External Links

ECOD PDB View: 7L2T RCSB PDB: 7L2T PDBe: 7L2T

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.