ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ymxB2 - ECOD Domain | ECOD

ECOD/Domains/e1ymxB2

e1ymxB2

UID: 000281750

PDB

Range: B:27-65,B:180-290
PDB: 1YMX chain B(all domains)
UniProt: Q9L5C8 (all domains)
Gene: blaCTX-M-9a

Molecule: beta-lactamase CTX-M-9

3D Structure

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Related Domains

Browse other domains in Beta-lactamase2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyBeta-lactamase2(223.3.1.8)

Ligands

in contact, ≤ 4 Å

(2R)-5-[(carbamoyloxy)methyl]-2-{(1S)-1-methoxy-2-oxo-1-[(thiophen-2-ylacetyl)amino]ethyl}-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid1QL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13354Beta-lactamase2

Beta-lactamase enzyme family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 1YMX RCSB PDB: 1YMX PDBe: 1YMX UniProt: Q9L5C8

Downloads

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