ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ajzB2 - ECOD Domain | ECOD

ECOD/Domains/e7ajzB2

e7ajzB2

UID: 002819654

PDB

Range: B:169-284
PDB: 7AJZ chain B(all domains)

Molecule: L,D-transpeptidase YcbB

3D Structure

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Related Domains

Browse other domains in PG_binding_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupPGBD-like(144)

HH-groupPGBD-like(144.1)

TT-groupPGBD-like(144.1.1)

FFamilyPG_binding_1(144.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01471PG_binding_1

Putative peptidoglycan binding domain

ClanCL0244PGBD

External Links

ECOD PDB View: 7AJZ RCSB PDB: 7AJZ PDBe: 7AJZ

Downloads

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