ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1r8eA1 - ECOD Domain | ECOD

ECOD/Domains/e1r8eA1

e1r8eA1

UID: 000002824

RepresentativePDB

Range: A:3-120
PDB: 1R8E chain A(all domains)
UniProt: P39075 (all domains)
Gene: bmrR

Molecule: multidrug-efflux transporter regulator

3D Structure

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Related Domains

Browse other domains in MerR_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupPutative DNA-binding domain(101.1.9)

FFamilyMerR_1(101.1.9.17)

Ligands

in contact, ≤ 4 Å

TetraphenylphosphoniumP4P

+ 2 additives (Glycerin, Imidazole)

GlycerinGOL
DrugBank DB09462
ImidazoleIMD

Pfam Families

MerR HTH family regulatory protein

ClanCL0123HTH

External Links

ECOD PDB View: 1R8E RCSB PDB: 1R8E PDBe: 1R8E UniProt: P39075

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.