ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7q9sBBB1 - ECOD Domain | ECOD

ECOD/Domains/e7q9sBBB1

e7q9sBBB1

UID: 002825508

PDB

Range: BBB:2-150
PDB: 7Q9S chain BBB(all domains)

Molecule: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta

3D Structure

Loading viewer...

Related Domains

Browse other domains in GMP_PDE_delta →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyGMP_PDE_delta(11.1.1.76)

Ligands

in contact, ≤ 4 Å

2-methyl-3-(1~{H}-pyrazol-5-yl)imidazo[1,2-a]pyridine9TI
FarnesylFAR

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4

Pfam Families

PF05351GMP_PDE_delta

GMP-PDE, delta subunit

ClanCL0159E-set

External Links

ECOD PDB View: 7Q9S RCSB PDB: 7Q9S PDBe: 7Q9S

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.