ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1q08A1 - ECOD Domain | ECOD

ECOD/Domains/e1q08A1

e1q08A1

UID: 000002827

RepresentativePDB

Range: A:43-136
PDB: 1Q08 chain A(all domains)
UniProt: P0ACS5 (all domains)
Gene: zntR

Molecule: Zn(II)-responsive regulator of zntA

3D Structure

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Related Domains

Browse other domains in MerR-DNA-bind, MerR_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupPutative DNA-binding domain(101.1.9)

FFamilyMerR-DNA-bind, MerR_1(101.1.9.82)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal
Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Phosphate ion)

Phosphate ion

Pfam Families

PF09278MerR-DNA-bind

MerR, DNA binding

ClanCL0123HTH

MerR HTH family regulatory protein

ClanCL0123HTH

External Links

ECOD PDB View: 1Q08 RCSB PDB: 1Q08 PDBe: 1Q08 UniProt: P0ACS5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.