ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1y53X1 - ECOD Domain | ECOD

ECOD/Domains/e1y53X1

e1y53X1

UID: 000282943

PDB

Range: X:3-122
PDB: 1Y53 chain X(all domains)
UniProt: P56734 (all domains)
Gene: AVR4;

Molecule: Avidin-related protein 4/5

3D Structure

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Related Domains

Browse other domains in Avidin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupAvidin/Streptavidin(9.2)

TT-groupAvidin/Streptavidin(9.2.1)

FFamilyAvidin(9.2.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Avidin family

External Links

ECOD PDB View: 1Y53 RCSB PDB: 1Y53 PDBe: 1Y53 UniProt: P56734

Downloads

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