ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7qf9BBB1 - ECOD Domain | ECOD

ECOD/Domains/e7qf9BBB1

e7qf9BBB1

UID: 002831887

PDB

Range: BBB:2-150
PDB: 7QF9 chain BBB(all domains)

Molecule: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta

3D Structure

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Related Domains

Browse other domains in GMP_PDE_delta →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyGMP_PDE_delta(11.1.1.76)

Ligands

in contact, ≤ 4 Å

O-methylcysteineCMT
FarnesylFAR

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF05351GMP_PDE_delta

GMP-PDE, delta subunit

ClanCL0159E-set

External Links

ECOD PDB View: 7QF9 RCSB PDB: 7QF9 PDBe: 7QF9

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.