ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7e7mC2 - ECOD Domain | ECOD

ECOD/Domains/e7e7mC2

e7e7mC2

UID: 002832672

PDB

Range: C:149-279
PDB: 7E7M chain C(all domains)

Molecule: D-ribose ABC transporter substrate-binding protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peripla_BP_4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_4(2007.1.2.11)

Ligands

in contact, ≤ 4 Å

beta-D-RibopyranoseRIP
drugDrugBank DB04286

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13407Peripla_BP_4

Periplasmic binding protein domain

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 7E7M RCSB PDB: 7E7M PDBe: 7E7M

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure