ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1luqA1 - ECOD Domain | ECOD

ECOD/Domains/e1luqA1

e1luqA1

UID: 000028331

PDB

Range: A:1016-1134
PDB: 1LUQ chain A(all domains)
UniProt: P22629 (all domains)

Molecule: Streptavidin

3D Structure

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Related Domains

Browse other domains in Avidin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupAvidin/Streptavidin(9.2)

TT-groupAvidin/Streptavidin(9.2.1)

FFamilyAvidin(9.2.1.1)

Ligands

in contact, ≤ 4 Å

BiotinBTN
drugDrugBank DB00121

+ 2 additives (Glycerin, (4r)-2-Methylpentane-2,4-Diol)

GlycerinGOL
DrugBank DB09462

Pfam Families

Avidin family

External Links

ECOD PDB View: 1LUQ RCSB PDB: 1LUQ PDBe: 1LUQ UniProt: P22629

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4r)-2-Methylpentane-2,4-Diol

DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.