ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1k24A1 - ECOD Domain | ECOD

ECOD/Domains/e1k24A1

e1k24A1

UID: 000028410

PDB

Range: A:7-253
PDB: 1K24 chain A(all domains)
UniProt: Q51227 (all domains)
Gene: opc

Molecule: outer membrane protein

3D Structure

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Related Domains

Browse other domains in OpcA →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupOMPT-like(5084.2)

TT-groupOMPT-like(5084.2.1)

FFamilyOpcA(5084.2.1.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Outer membrane protein OpcA

ClanCL0193MBB

External Links

ECOD PDB View: 1K24 RCSB PDB: 1K24 PDBe: 1K24 UniProt: Q51227

Downloads

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