ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xciB2 - ECOD Domain | ECOD

ECOD/Domains/e2xciB2

e2xciB2

UID: 002841265

RepresentativePDB

Range: B:1-162
PDB: 2XCI chain B(all domains)

Molecule: 3-DEOXY-D-MANNO-2-OCTULOSONIC ACID TRANSFERASE

3D Structure

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Related Domains

Browse other domains in Glycos_transf_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlycos_transf_N(7512.1.1.14)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Glycerin, Tetraethylene glycol)

GlycerinGOL
DrugBank DB09462
Tetraethylene glycolPG4

Shown in the structure viewer.

Pfam Families

PF04413Glycos_transf_N

3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)

ClanCL0113GT-B

External Links

ECOD PDB View: 2XCI RCSB PDB: 2XCI PDBe: 2XCI

Downloads

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Drug annotations from DrugDomain.