ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2xciC2 - ECOD Domain | ECOD

ECOD/Domains/e2xciC2

e2xciC2

UID: 002841267

PDB

Range: C:21-162
PDB: 2XCI chain C(all domains)

Molecule: 3-DEOXY-D-MANNO-2-OCTULOSONIC ACID TRANSFERASE

3D Structure

Loading viewer...

Related Domains

Browse other domains in Glycos_transf_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlycos_transf_N(7512.1.1.14)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
within 5 Å only

+ 2 additives (Glycerol, Tetraethylene glycol)

GlycerolGOL
Tetraethylene glycolPG4

Shown in the structure viewer.

Pfam Families

PF04413Glycos_transf_N

3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)

ClanCL0113GT-B

External Links

ECOD PDB View: 2XCI RCSB PDB: 2XCI PDBe: 2XCI

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.