ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7dkmB1 - ECOD Domain | ECOD

ECOD/Domains/e7dkmB1

e7dkmB1

UID: 002842270

PDB

Range: B:5-110,B:286-310
PDB: 7DKM chain B(all domains)

Molecule: D-3-phosphoglycerate dehydrogenase

3D Structure

Loading viewer...

Related Domains

Browse other domains in 2-Hacid_dh →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFormate/glycerate dehydrogenase catalytic domain-like(2003.1.11)

FFamily2-Hacid_dh(2003.1.11.1)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF003892-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7DKM RCSB PDB: 7DKM PDBe: 7DKM

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure