ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7kpfB1 - ECOD Domain | ECOD

ECOD/Domains/e7kpfB1

e7kpfB1

UID: 002842367

PDB

Range: B:1-152
PDB: 7KPF chain B(all domains)

Molecule: Nucleoside diphosphate kinase B

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupNucleoside diphosphate kinases(304.34)

TT-groupNucleoside diphosphate kinases(304.34.1)

FFamilyNDK(304.34.1.1)

Ligands

in contact, ≤ 4 Å

Myristoyl-CoaMYA
drugDrugBank DB02180within 5 Å only
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Nucleoside diphosphate kinase

External Links

ECOD PDB View: 7KPF RCSB PDB: 7KPF PDBe: 7KPF

Downloads

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