ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7o9fB1 - ECOD Domain | ECOD

ECOD/Domains/e7o9fB1

e7o9fB1

UID: 002842531

PDB

Range: B:90-300
PDB: 7O9F chain B(all domains)

Molecule: Signal recognition particle protein

3D Structure

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Related Domains

Browse other domains in SRP54 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySRP54(2004.1.1.43)

Ligands

in contact, ≤ 4 Å

Guanosine tetraphosphateG4P
drugDrugBank DB04022
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SRP54-type protein, GTPase domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 7O9F RCSB PDB: 7O9F PDBe: 7O9F

Downloads

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