ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7omiDDD2 - ECOD Domain | ECOD

ECOD/Domains/e7omiDDD2

e7omiDDD2

UID: 002842558

PDB

Range: DDD:385-608
PDB: 7OMI chain DDD(all domains)

Molecule: Glyco_hydro_42M domain-containing protein

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_42M →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupClass I glutamine amidotransferase-like(2007.1.1)

FFamilyGlyco_hydro_42M(2007.1.1.13)

Ligands

in contact, ≤ 4 Å

L-tartaric acidTLA
drugDrugBank DB09459

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08532Glyco_hydro_42M

Beta-galactosidase trimerisation domain

ClanCL0014Glutaminase_I

External Links

ECOD PDB View: 7OMI RCSB PDB: 7OMI PDBe: 7OMI

Downloads

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