ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7pt1A1 - ECOD Domain | ECOD

ECOD/Domains/e7pt1A1

e7pt1A1

UID: 002842659

PDB

Range: A:200-378,A:562-588
PDB: 7PT1 chain A(all domains)

Molecule: 2-hydroxyacyl-CoA lyase

3D Structure

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Related Domains

Browse other domains in TPP_enzyme_M →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilyTPP_enzyme_M(2003.1.4.1)

Ligands

in contact, ≤ 4 Å

S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} 2-hydroxy-2-methylpropanethioate3KK

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00205TPP_enzyme_M

Thiamine pyrophosphate enzyme, central domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7PT1 RCSB PDB: 7PT1 PDBe: 7PT1

Downloads

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