ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ljpB1 - ECOD Domain | ECOD

ECOD/Domains/e7ljpB1

e7ljpB1

UID: 002846212

PDB

Range: B:0-132
PDB: 7LJP chain B(all domains)

Molecule: SsrA-binding protein

3D Structure

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Related Domains

Browse other domains in SmpB →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupSmall protein B (SmpB)(2.21)

TT-groupSmall protein B (SmpB)(2.21.1)

FFamilySmpB(2.21.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (1,4-Dioxane, Glycerin, Sulfate ion)

1,4-DioxaneDIO
DrugBank DB03316
GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

SmpB protein

External Links

ECOD PDB View: 7LJP RCSB PDB: 7LJP PDBe: 7LJP

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.