ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7lscB1 - ECOD Domain | ECOD

ECOD/Domains/e7lscB1

e7lscB1

UID: 002846383

PDB

Range: B:1-147
PDB: 7LSC chain B(all domains)

Molecule: miRFP670nano3

3D Structure

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Related Domains

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Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyGAF(223.1.1.3)

Ligands

in contact, ≤ 4 Å

3-[2-[(~{Z})-[5-[(~{Z})-[(3~{S},4~{R})-3-ethenyl-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-2-ylidene]methyl]-5-[(~{Z})-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acidJRA

Shown in the structure viewer.

Pfam Families

GAF domain

ClanCL0161GAF

External Links

ECOD PDB View: 7LSC RCSB PDB: 7LSC PDBe: 7LSC

Downloads

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