ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7mehA2 - ECOD Domain | ECOD

ECOD/Domains/e7mehA2

e7mehA2

UID: 002846719

PDB

Range: A:99-205
PDB: 7MEH chain A(all domains)

Molecule: Beta-lactamase

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyTranspeptidase(4019.1.1.3)

Ligands

in contact, ≤ 4 Å

(2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamideNXL

+ 3 additives (Sulfate ion, Imidazole, (4S)-2-METHYL-2,4-PENTANEDIOL)

Sulfate ionSO4
DrugBank DB14546
ImidazoleIMD

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 7MEH RCSB PDB: 7MEH PDBe: 7MEH

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4S)-2-METHYL-2,4-PENTANEDIOLMPD

Shown in the structure viewer. Drug annotations from DrugDomain.