ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ne3A1 - ECOD Domain | ECOD

ECOD/Domains/e7ne3A1

e7ne3A1

UID: 002848424

PDB

Range: A:1132-1463,A:1842-1925
PDB: 7NE3 chain A(all domains)

Molecule: Methylcytosine dioxygenase TET2

3D Structure

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Related Domains

Browse other domains in Tet_JBP →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyTet_JBP(10.12.1.47)

Ligands

in contact, ≤ 4 Å

FE (II) IONFE2
metal
N-oxalylglycineOGA
Zinc ionZN

Pfam Families

PF12851Tet_JBP

Oxygenase domain of the 2OGFeDO superfamily

ClanCL0029Cupin

External Links

ECOD PDB View: 7NE3 RCSB PDB: 7NE3 PDBe: 7NE3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 2 additives (2-(N-morpholino)ethanesulfonic acid, 1,2-ETHANEDIOL)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.