ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7oiwA1 - ECOD Domain | ECOD

ECOD/Domains/e7oiwA1

e7oiwA1

UID: 002849847

PDB

Range: A:12-203
PDB: 7OIW chain A(all domains)

Molecule: GTP pyrophosphokinase

3D Structure

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Related Domains

Browse other domains in HD_4 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupHD-domain/PDEase-like(131.1)

TT-groupHD-domain/PDEase-like(131.1.1)

FFamilyHD_4(131.1.1.12)

Ligands

in contact, ≤ 4 Å

Iodide ionIOD
Magnesium ionMG
metal
MANGANESE (II) IONMN
metal
[[(3~{a}~{R},4~{R},6~{R},6~{a}~{R})-4-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-2-oxidanyl-2-oxidanylidene-3~{a},4,6,6~{a}-tetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-6-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate

Pfam Families

HD domain

ClanCL0237HD_PDEase

External Links

ECOD PDB View: 7OIW RCSB PDB: 7OIW PDBe: 7OIW

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)0O2

within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.