ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7ookC1 - ECOD Domain | ECOD

ECOD/Domains/e7ookC1

e7ookC1

UID: 002849992

PDB

Range: C:245-384
PDB: 7OOK chain C(all domains)

Molecule: Major capsid protein P3

3D Structure

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Related Domains

Browse other domains in P3_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyP3_C(10.2.1.87)

Ligands

in contact, ≤ 4 Å

ChlorpromazineZ80
drugDrugBank DB00477

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Pfam Families

P3 major capsid protein C-terminal

ClanCL0611Hexon

External Links

ECOD PDB View: 7OOK RCSB PDB: 7OOK PDBe: 7OOK

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.