ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1zp0D1 - ECOD Domain | ECOD

ECOD/Domains/e1zp0D1

e1zp0D1

UID: 000285137

PDB

Range: D:35-136
PDB: 1ZP0 chain D(all domains)
UniProt: A5GZW8 (all domains)
Gene: SDHD

Molecule: Small cytochrome binding protein

3D Structure

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Related Domains

Browse other domains in CybS →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupFumarate reductase respiratory complex transmembrane subunits(5069.1.3)

FFamilyCybS(5069.1.3.4)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
ThenoyltrifluoroacetoneTTF
drugDrugBank DB04795

Shown in the structure viewer.

Pfam Families

CybS, succinate dehydrogenase cytochrome B small subunit

ClanCL0335FumRed-TM

External Links

ECOD PDB View: 1ZP0 RCSB PDB: 1ZP0 PDBe: 1ZP0 UniProt: A5GZW8

Downloads

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Drug annotations from DrugDomain.