ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7pd1B1 - ECOD Domain | ECOD

ECOD/Domains/e7pd1B1

e7pd1B1

UID: 002851532

PDB

Range: B:1-367
PDB: 7PD1 chain B(all domains)

Molecule: Thiazole biosynthesis protein ThiH

3D Structure

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Related Domains

Browse other domains in Radical_SAM,BATS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM,BATS(2002.1.1.122)

Ligands

in contact, ≤ 4 Å

MethionineMET
drugDrugBank DB00134
TyrosineTYR
drugDrugBank DB00135
5'-DEOXYADENOSINE

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

Biotin and Thiamin Synthesis associated domain

External Links

ECOD PDB View: 7PD1 RCSB PDB: 7PD1 PDBe: 7PD1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Bromide ionBR

Iron/sulfur clusterSF4

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.