ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7pgbc1 - ECOD Domain | ECOD

ECOD/Domains/e7pgbc1

e7pgbc1

UID: 002851987

PDB

Range: c:148-260
PDB: 7PGB chain c(all domains)

Molecule: Ion transport protein,Voltage-gated sodium channel

3D Structure

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Related Domains

Browse other domains in Ion_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans(5054.1.1.2)

Ligands

in contact, ≤ 4 Å

1,2-Dipalmitoyl-Phosphatidyl-GlyceroleLHG
drugDrugBank DB02043
4-NITROBENZOIC ACID4NB
N-octaneOCT

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

External Links

ECOD PDB View: 7PGB RCSB PDB: 7PGB PDBe: 7PGB

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

PentaneLNK

within 5 Å only

+ 1 additive (2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL)

2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOLPE4

Shown in the structure viewer. Drug annotations from DrugDomain.