ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vyoB1 - ECOD Domain | ECOD

ECOD/Domains/e1vyoB1

e1vyoB1

UID: 000285473

PDB

Range: B:2-123
PDB: 1VYO chain B(all domains)
UniProt: P02701 (all domains)
Gene: AVD

Molecule: AVIDIN

3D Structure

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Related Domains

Browse other domains in Avidin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupAvidin/Streptavidin(9.2)

TT-groupAvidin/Streptavidin(9.2.1)

FFamilyAvidin(9.2.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Avidin family

External Links

ECOD PDB View: 1VYO RCSB PDB: 1VYO PDBe: 1VYO UniProt: P02701

Downloads

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