ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7qbgC2 - ECOD Domain | ECOD

ECOD/Domains/e7qbgC2

e7qbgC2

UID: 002857059

PDB

Range: C:3-304
PDB: 7QBG chain C(all domains)

Molecule: Transcobalamin-2

3D Structure

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Related Domains

Browse other domains in Cobalamin_bind →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyCobalamin_bind(109.2.1.4)

Ligands

in contact, ≤ 4 Å

CyanocobalaminCNC
drugDrugBank DB00115
Calcium ionCA
metalwithin 5 Å only

+ 1 additive (Glycerin)

Pfam Families

PF01122Cobalamin_bind

Eukaryotic cobalamin-binding protein

ClanCL00596_Hairpin

External Links

ECOD PDB View: 7QBG RCSB PDB: 7QBG PDBe: 7QBG

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.