ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7qciA1 - ECOD Domain | ECOD

ECOD/Domains/e7qciA1

e7qciA1

UID: 002857075

PDB

Range: A:1-60
PDB: 7QCI chain A(all domains)

Molecule: Papain-like protease nsp3

3D Structure

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Related Domains

Browse other domains in CoV_peptidase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyCoV_peptidase(221.1.1.32)

Ligands

in contact, ≤ 4 Å

N-(3,4-dihydroxybenzylidene)-thiosemicarbazoneA6Q

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4

Pfam Families

PF08715CoV_peptidase

Coronavirus papain-like peptidase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 7QCI RCSB PDB: 7QCI PDBe: 7QCI

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.