ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5s9nA2 - ECOD Domain | ECOD

ECOD/Domains/e5s9nA2

e5s9nA2

UID: 002860134

PDB

Range: A:540-864
PDB: 5S9N chain A(all domains)

Molecule: Isoform 2 of Ectonucleotide pyrophosphatase/phosphodiesterase family member 2

3D Structure

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Related Domains

Browse other domains in Endonuclease_NS →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupHis-Me finger endonucleases(378)

HH-groupHis-Me finger endonucleases(378.1)

TT-groupHis-Me finger endonucleases(378.1.1)

FFamilyEndonuclease_NS(378.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL
Sodium ionNA
metal

Shown in the structure viewer.

Pfam Families

PF01223Endonuclease_NS

DNA/RNA non-specific endonuclease

ClanCL0263His-Me_finger

External Links

ECOD PDB View: 5S9N RCSB PDB: 5S9N PDBe: 5S9N

Downloads

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Drug annotations from DrugDomain.