ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5sddB1 - ECOD Domain | ECOD

ECOD/Domains/e5sddB1

e5sddB1

UID: 002860611

PDB

Range: B:280-571
PDB: 5SDD chain B(all domains)

Molecule: Asp/Glu-specific dipeptidyl-peptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_S46 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupHelical bundle domain in S46 peptidase(6151)

HH-groupHelical bundle domain in S46 peptidase(6151.1)

TT-groupHelical bundle domain in S46 peptidase(6151.1.1)

FFamilyPeptidase_S46(6151.1.1.1)

Ligands

in contact, ≤ 4 Å

2-[(4-methyl-1H-imidazol-5-yl)methyl]-1,2,3,4-tetrahydroisoquinoline2L1

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10459Peptidase_S46

Peptidase S46

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5SDD RCSB PDB: 5SDD PDBe: 5SDD

Downloads

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